euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

139 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip654 chr1 49428739 49428739 - unknown germline . no 223 AGBL4
srip1813 chr1 75192898 75192898 - unknown germline . no 223 CRYZ
srip2073 chr1 83609736 83609736 - unknown germline . no 223 .
srip2474 chr1 95801848 95801848 - unknown germline . no 223 .
srip3901 chr1 119553359 119553359 + unknown germline . no 223 .
srip4122 chr1 149308428 149308428 + unknown germline . no 223 LOC645262
srip4748 chr1 165553142 165553142 - unknown germline . no 223 .
srip6449 chr1 217548991 217548991 - unknown germline . no 223 .
srip7074 chr1 231007802 231007802 - unknown germline . no 223 .
srip7215 chr1 237449858 237449858 . unknown germline . no 223 RYR2
srip7659 chr10 6858547 6858547 - unknown germline . no 223 LOC100507127
srip7779 chr10 16324609 16324609 + unknown germline . no 223 .
srip8447 chr10 25707690 25707690 - unknown germline . no 223 GPR158
srip12794 chr11 25123346 25123346 - unknown germline . no 223 .
srip13810 chr11 33670130 33670130 + unknown germline . no 223 C11orf41
srip15369 chr11 58171843 58171843 + unknown germline . no 223 .
srip17176 chr11 94684368 94684368 + unknown germline . no 223 .
srip17667 chr11 104556129 104556129 - unknown germline . no 223 .
srip18128 chr11 111082407 111082407 . unknown germline . no 223 .
srip18240 chr11 112084613 112084613 + unknown germline . no 223 BCO2
srip18344 chr11 121131527 121131527 . unknown germline . no 223 .
srip19256 chr11 134305645 134305645 - unknown germline . no 223 .
srip19754 chr12 11191379 11191379 - unknown germline . no 223 PRH1-PRR4
srip19887 chr12 11219195 11219195 - unknown germline . no 223 PRH1-PRR4
srip20733 chr12 28226418 28226418 - unknown germline . no 223 .
srip22235 chr12 43256979 43256979 - unknown germline . no 223 .
srip24635 chr12 84965140 84965140 + unknown germline . no 223 .
srip24899 chr12 85506283 85506283 + unknown germline . no 223 LRRIQ1
srip26098 chr12 120990856 120990856 . unknown germline . no 223 RNF10
srip26379 chr12 126802936 126802936 - unknown germline . no 223 .
srip26892 chr13 22489797 22489797 + unknown germline . no 223 .
srip27349 chr13 27488117 27488117 + unknown germline . no 223 .
srip28003 chr13 42771398 42771398 + unknown germline . no 223 DGKH
srip29198 chr13 61462344 61462344 - unknown germline . no 223 .
srip29643 chr13 61734491 61734491 . unknown germline . no 223 .
srip30438 chr13 74613213 74613213 - unknown germline . no 223 KLF12
srip32001 chr13 86340151 86340151 - unknown germline . no 223 .
srip33540 chr13 104296230 104296230 - unknown germline . no 223 .
srip35200 chr14 28301256 28301256 + unknown germline . no 223 .
srip35868 chr14 36674752 36674752 + unknown germline . no 223 .
srip36302 chr14 39875089 39875089 + unknown germline . no 223 FBXO33
srip37398 chr14 59522425 59522425 - unknown germline . no 223 .
srip39342 chr15 28175797 28175797 - unknown germline . no 223 OCA2
srip39733 chr15 37707890 37707890 - unknown germline . no 223 .
srip42536 chr15 83551628 83551628 - unknown germline . no 223 HOMER2
srip42603 chr15 85140899 85140899 + unknown germline . no 223 .
srip43246 chr15 100931152 100931152 - unknown germline . no 223 .
srip43573 chr16 6793828 6793828 + unknown germline . no 223 RBFOX1
srip45502 chr16 33992437 33992437 . unknown germline . no 223 .
srip46532 chr17 6341639 6341639 - unknown germline . no 223 .
srip47710 chr17 32813627 32813627 . unknown germline . no 223 .
srip48958 chr18 15095248 15095248 - unknown germline . no 223 .
srip49440 chr18 28732910 28732910 - unknown germline . no 223 DSC1
srip51096 chr18 60730914 60730914 . unknown germline . no 223 .
srip51828 chr18 74960069 74960069 - unknown germline . no 223 .
srip52758 chr2 6798283 6798283 - unknown germline . no 223 .
srip52786 chr2 7050600 7050600 + unknown germline . no 223 .
srip53087 chr2 20076851 20076851 + unknown germline . no 223 FLJ12334
srip54262 chr2 36570259 36570259 - unknown germline . no 223 .
srip57895 chr2 137426135 137426135 - unknown germline . no 223 .
srip59201 chr2 147020925 147020925 + unknown germline . no 223 .
srip61130 chr2 199779906 199779906 + unknown germline . no 223 .
srip62118 chr2 221503757 221503757 - unknown germline . no 223 .
srip63059 chr20 7292193 7292193 + unknown germline . no 223 .
srip63468 chr20 16479499 16479499 - unknown germline . no 223 KIF16B
srip64016 chr20 25895497 25895497 - unknown germline . no 223 .
srip64779 chr20 41952105 41952105 - unknown germline . no 223 .
srip65862 chr21 19517305 19517305 - unknown germline . no 223 .
srip67496 chr22 22486374 22486374 - unknown germline . no 223 IGL@
srip67845 chr22 22715595 22715595 + unknown germline . no 223 IGL@
srip70457 chr3 20748900 20748900 - unknown germline . no 223 .
srip72032 chr3 43262676 43262676 + unknown germline . no 223 .
srip72699 chr3 55788572 55788572 + unknown germline . no 223 ERC2
srip73796 chr3 75101217 75101217 + unknown germline . no 223 .
srip73931 chr3 75733774 75733774 - unknown germline . no 223 .
srip74448 chr3 80590169 80590169 - unknown germline . no 223 .
srip75594 chr3 85576556 85576556 + unknown germline . no 223 CADM2
srip76601 chr3 109751763 109751763 + unknown germline . no 223 .
srip77241 chr3 123590719 123590719 + unknown germline . no 223 MYLK
srip78649 chr3 151148549 151148549 - unknown germline . no 223 MED12L
srip80237 chr3 175677977 175677977 - unknown germline . no 223 .
srip80349 chr3 176091325 176091325 + unknown germline . no 223 .
srip80852 chr3 181192836 181192836 + unknown germline . no 223 .
srip82103 chr3 193354172 193354172 - unknown germline . no 223 OPA1
srip84048 chr4 37952113 37952113 - unknown germline . no 223 TBC1D1
srip84702 chr4 47007787 47007787 - unknown germline . no 223 .
srip85379 chr4 57497060 57497060 - unknown germline . no 223 .
srip85765 chr4 58917522 58917522 - unknown germline . no 223 .
srip86214 chr4 66413933 66413933 + unknown germline . no 223 EPHA5
srip92188 chr4 134596423 134596423 + unknown germline . no 223 .
srip93874 chr4 158907280 158907280 - unknown germline . no 223 .
srip95379 chr4 190659701 190659701 + unknown germline . no 223 .
srip96928 chr5 21873984 21873984 . unknown germline . no 223 CDH12
srip97761 chr5 33633341 33633341 . unknown germline . no 223 ADAMTS12
srip99506 chr5 68263468 68263468 - unknown germline . no 223 .
srip100724 chr5 89450775 89450775 + unknown germline . no 223 .
srip101683 chr5 105935368 105935368 + unknown germline . no 223 .
srip103358 chr5 125040043 125040043 + unknown germline . no 223 .
srip103595 chr5 135023720 135023720 . unknown germline . no 223 .
srip104861 chr5 154873935 154873935 - unknown germline . no 223 .
srip108700 chr6 46310298 46310298 + unknown germline . no 223 .
srip109538 chr6 63368202 63368202 + unknown germline . no 223 .
srip111035 chr6 77980645 77980645 - unknown germline . no 223 .
srip112297 chr6 91767660 91767660 . unknown germline . no 223 .
srip112701 chr6 102283763 102283763 - unknown germline . no 223 GRIK2
srip113345 chr6 123853943 123853943 - unknown germline . no 223 TRDN
srip113544 chr6 134820049 134820049 . unknown germline . no 223 LOC154092
srip113628 chr6 140401920 140401920 - unknown germline . no 223 .
srip113812 chr6 142450105 142450105 - unknown germline . no 223 .
srip114763 chr6 148195798 148195798 + unknown germline . no 223 .
srip116194 chr7 9694178 9694178 + unknown germline . no 223 .
srip116214 chr7 10547947 10547947 + unknown germline . no 223 .
srip116291 chr7 17094707 17094707 + unknown germline . no 223 .
srip118291 chr7 62492938 62492938 + unknown germline . no 223 .
srip119188 chr7 81056083 81056083 . unknown germline . no 223 .
srip119647 chr7 84901718 84901718 - unknown germline . no 223 .
srip121743 chr7 107829256 107829256 + unknown germline . no 223 NRCAM
srip122000 chr7 108325669 108325669 + unknown germline . no 223 .
srip122272 chr7 110484750 110484750 + unknown germline . no 223 IMMP2L
srip124080 chr8 4452901 4452901 - unknown germline . no 223 CSMD1
srip124375 chr8 5829282 5829282 - unknown germline . no 223 .
srip125437 chr8 24926547 24926547 - unknown germline . no 223 .
srip126888 chr8 67381884 67381884 - unknown germline . no 223 .
srip127432 chr8 72399227 72399227 - unknown germline . no 223 .
srip128278 chr8 87315042 87315042 + unknown germline . no 223 .
srip129660 chr8 119721696 119721696 - unknown germline . no 223 SAMD12-AS1
srip131080 chr9 6290487 6290487 + unknown germline . no 223 .
srip132363 chr9 30495885 30495885 - unknown germline . no 223 .
srip132563 chr9 30674459 30674459 - unknown germline . no 223 .
srip132865 chr9 32092741 32092741 - unknown germline . no 223 .
srip133418 chr9 32463891 32463891 - unknown germline . no 223 DDX58
srip133623 chr9 34904794 34904794 - unknown germline . no 223 .
srip135888 chr9 118083873 118083873 . unknown germline . no 223 DEC1
srip137247 chrX 54917144 54917144 + unknown germline . no 223 .
srip139710 chrX 98264287 98264287 . unknown germline . no 223 .
srip140459 chrX 111557754 111557754 - unknown germline . no 223 ZCCHC16
srip140820 chrX 119892837 119892837 - unknown germline . no 223 .
srip141071 chrX 122664864 122664864 - unknown germline . no 223 .
srip141374 chrX 129525275 129525275 - unknown germline . no 223 .